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Jussi Koivumäki

yliopistonlehtori, Biomedical Engineering
Tampereen yliopisto
puhelinnumero+358505056897
Hervannan kampus

Luottamustoimet

  • Juniversity, member of the steering group

Tutkimustavoitteet

In science, I have a longstanding interest in employing computational models of cardiac muscle cells (cardiomyocytes) and tissue to study the

  1. cellular triggers and substrates that cause and maintain arrhythmias,
  2. phenotypic characteristics of immature cardiomyocytes,
  3. pathomechanisms related to cardiac contractile (dys-)function, and
  4. effect of cellular signalling on excitation-contraction coupling.

In teaching, I'm interested in investigating and applying different teaching approaches and learning environments in the field of technical sciences in higher education, particularly the flipped learning and blended learning approaches.

  • In 2021, I was partially employed by the FLIP&Learn project that is conducted in collaboration with University of Eastern Finland, Tampere University and University of Turku. During that time, I developed the first flipped implementation for Biomedical Engineering Principles course. 

Tutkimusyksikkö

Computational Biophysics and Imaging Group

Tieteenalat

  • heart
  • systemsphysiology
  • excitation-contraction coupling
  • arrhythmias
  • intracellular Ca2+ dynamics

Tutkimusura

  • University Lecturer; Tampere University, FI; current position
    • Visiting Researcher; IEPT, UKE, DE; 04-05/2018
  • Postdoctoral Researcher; Tampere University, FI; --> 12/2020
  • Postdoctoral Researcher; University of Eastern Finland, FI; --> 02/2018
    • Visiting Researcher; UC Davis, USA; 10-11/2016
  • Researcher Scientist (part-time); Fibrux Ltd (startup company), FI; 03-06/2015
  • Researcher Scientist (full-time consulting); Stanford School of Medicine, USA; 01-03/2015
  • Postdoctoral Fellow; Simula Research Laboratory, NO; --> 12/2014
    • Visiting Researcher; KIT, Karlsruhe, DE; 01-02/2012
  • Postdoctoral Researcher; University of Eastern Finland, FI; --> 07/2011
  • Graduate Student; University of Oulu, FI; --> 12/2009

Merkittävimmät julkaisut

  • JT Koivumäki, T Korhonen, P Tavi
    Impact of sarcoplasmic reticulum calcium release on calcium dynamics and action potential morphology in human atrial myocytes: a computational study
    PLoS Comput Biol 7(1): e1001067. 2011. DOI: 10.1371/journal.pcbi.1001067 
  • JT Koivumäki, N Naumenko, T Tuomainen, J Takalo, M Oksanen, KA Puttonen, S Lehtonen, J Kuusisto, M Laakso, J Koistinaho, P Tavi
    Structural immaturity of human iPSC-derived cardiomyocytes: in silico investigation of effects on function and disease modelling
    Front Physiol 9:80. 2018. DOI: 10.3389/fphys.2018.00080 
  • JT Koivumäki, G Seemann, MM Maleckar, P Tavi
    In silico screening of the key cellular remodeling targets in chronic atrial fibrillation
    PLoS Comput Biol 10(5): e1003620. 2014. DOI: 10.1371/journal.pcbi.1003620 
  • MD Lemoine, T Krause, JT Koivumäki, M Prondzynski, ML Schulze, E Girdauskas, S Willems, A Hansen, T Eschenhagen, T Christ
    Human iPSC-derived engineered heart tissue as a sensitive test system for QT prolongation and arrhythmic triggers
    Circ Arrhythm Electrophysiol 11:e006035. 2018. DOI: 10.1161/CIRCEP.117.006035 
  • L Skibsbye, T Jespersen, T Christ, MM Maleckar, J van den Brink, P Tavi, JT Koivumäki
    Refractoriness in human atria: Time and voltage dependence of sodium channel availability
    J Mol Cell Cardiol 101:26–34. 2016. DOI: 10.1016/j.yjmcc.2016.10.009