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Arkistoitu opetusohjelma 2014–2015
Selaat vanhentunutta opetusohjelmaa. Voimassa olevan opetusohjelman löydät täältä.
Master´s Degree Programme in Bioinformatics
Näytä opetusohjelma tiivistelmänä

Periodit

I Periodi (1.9.2014 – 24.10.2014)
II Periodi (27.10.2014 – 19.12.2014)
III Periodi (7.1.2015 – 13.3.2015)
IV Periodi (16.3.2015 – 31.7.2015)
Periodi (1.9.2014 - 24.10.2014)
Syventävät opinnot [I Periodi]

Vieraalla kielellä annettava opetus [I Periodi]

BIO2200 Introduction to Computational Biology 3 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Nykter, Teacher responsible
matti.nykter[ät]uta.fi
Teaching
3-Sep-2014 – 22-Oct-2014
Lectures 16 hours
Lectures
Wed 3-Sep-2014 - 22-Oct-2014 weekly at 9-11, FM1 lecture hall (3rd floor)
Exercises 16 hours
Exercises group I
Wed 10-Sep-2014 - 22-Oct-2014 weekly at 10-12, Computer classroom ML74, FM1, 5th floor, Group I. Weekly meetings.
Exercises group II
Tue 9-Sep-2014 - 21-Oct-2014 weekly at 9-11, Computer classroom ML74, FM1, 5th floor, Group II. Weekly meetings.
Exercises group III
Tue 9-Sep-2014 - 21-Oct-2014 weekly at 15-17, Computer classroom ML74, FM1, 5th floor, Group III. Weekly meetings.
Periods: I
Language of instruction: English
Further information:

Recommended during the first year of the Master's degree programme.

BIO2210 Introduction to Molecular Biology 6 ECTS
Enrolment for University Studies
Enrolment time has expired
Kirsi Granberg, Teacher responsible
kirsi.granberg[ät]uta.fi
Teaching
2-Sep-2014 – 18-Dec-2014
Lectures
Lectures
Tue 9-Sep-2014 - 16-Dec-2014 weekly at 9-11, HISTO classroom, FM1 5th floor, The course starts on 9th September.
Thu 11-Sep-2014 - 18-Dec-2014 weekly at 9-11, Lecture room A+B FM1, 3rd floor
Periods: I II
Language of instruction: English
Further information:

Recommended for first year bioinformatics students.

BIO2310 Mathematics and statistics for bioinformatics 6 ECTS
Enrolment for University Studies
Enrolment time has expired
Juha Kesseli, Teacher responsible
juha.kesseli[ät]uta.fi
Teaching
5-Sep-2014 – 19-Dec-2014
Lectures
Lectures
Fri 5-Sep-2014 - 19-Dec-2014 weekly at 9-12, Computer classroom
Exercises
Exercises
Thu 11-Sep-2014 - 18-Dec-2014 weekly at 13-15, Computer classroom
Periods: I II
Language of instruction: English
Further information:

Recommended time of study in the first year of the programme.

BIO2350 Programming and Algorithms for Bioinformatics I 6 - 8 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Annala, Teacher responsible
matti.annala[ät]uta.fi
Teaching
3-Sep-2014 – 17-Dec-2014
Lectures
Lectures
Wed 3-Sep-2014 - 17-Dec-2014 weekly at 12-15, Computer classroom
Exercises
Exercises
Fri 12-Sep-2014 - 19-Dec-2014 weekly at 13-15, Computer classroom
Periods: I II
Language of instruction: English
Further information:

Recommended for first year bioinformatics students.

BIO4470 Systems biology methods 4 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Nykter, Teacher responsible
matti.nykter[ät]uta.fi
Juha Kesseli, Teacher
juha.kesseli[ät]uta.fi
Teaching
4-Sep-2014 – 24-Oct-2014
Lectures 24 hours
Lectures
Thu 4-Sep-2014 - 23-Oct-2014 weekly at 9-12, Computer classroom ML74, FM1 (5th floor)
Exercises 20 hours Web-based
Periods: I
Language of instruction: English
Further information:

Recommended during the second year of study in the bioinformatics programme. Prerequisites: BIO2200 Introduction to computational biology, BIO4440 Basic biological data analysis with R & BIO4450 High-throughput data analysis or equivalent prior knowledge in the field.

BIO4460 Journal Club 2 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Nykter, Teacher responsible
matti.nykter[ät]uta.fi
Teaching
8-Sep-2014 – 18-May-2015
Seminar
Seminar
Mon 8-Sep-2014 - 18-May-2015 every other week at 9-10, Lecture room A+B, FM1, erd floor
Periods: I II III IV
Language of instruction: English
Further information:

Seminar sessions on Monday mornings every second week as specified in the Teaching schedule. Possible changes announced separately.

BIO4380 Bioinformatics project 3 - 6 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Nykter, Teacher responsible
matti.nykter[ät]uta.fi
Teaching
1-Sep-2014 – 22-May-2015
Independent work
Periods: I II III IV
Language of instruction: English
Further information:

No contact teaching. Individual work on specified project.

BIO4390 Bioinformatics work course 4 ECTS
Enrolment for University Studies
Enrolment time has expired
Matti Nykter, Teacher responsible
matti.nykter[ät]uta.fi
Teaching
1-Sep-2014 – 24-Oct-2014
Lectures 30 hours Web-based
Periods: I
Language of instruction: English
Further information:

Recommended during the second year of study in the bioinformatics programme. Open for exchange students with suitable prior knowledge in the topic of the course.

Not offered in 2014-15.

Yleisopinnot [I Periodi]

Vieraalla kielellä annettava opetus [I Periodi]

BIO0020 Orientation 2 ECTS

The course consists of three parts: The Orientation course for international students at UTA, 25-30.8.2014, the Orientation sessions related to academic culture and degree studies (on 27 August and 8 September) and separate orientation lectures and events of the degree programme, the times of which are announced separately.

Enrolment for University Studies
Enrolment time has expired
Catarina Ståhle-Nieminen, Teacher responsible
catarina.stahle-nieminen[ät]uta.fi
Teaching
25-Aug-2014 – 17-Oct-2014
Lectures
Independent work
Periods: I
Language of instruction: English
Further information:

Information sessions organised by the programme will be announced separately before the course start.

BIO0030 Study skills and personal study planning 2 ECTS

The course consists of personal study planning sessions with the teachers, other information sessions and four sessions of teaching by the Tertio health sciences library.

Enrolment for University Studies
Enrolment time has expired
Catarina Ståhle-Nieminen, Teacher responsible
catarina.stahle-nieminen[ät]uta.fi
Teaching
1-Sep-2014 – 19-Dec-2014
Lectures
Library teaching
Tue 16-Sep-2014 at 11.30-12.30, Tertio library, Arvo building, Library orientation
Tue 30-Sep-2014 at 12.15-14.30, Tertio library, Arvo building, Advanced information searching I
Tue 7-Oct-2014 at 12.15-13.45, Tertio library, Arvo building, Refworks
Tue 14-Oct-2014 at 12.15-14.30, Tertio library, Arvo building, Advanced information searching II
Exercises
Independent work
Periods: I II
Language of instruction: English
Further information:

Personal study plan sessions and other information sessions organised by the programme will be announced separately before the course start.

KKSU1 Elementary Course 1 3 ECTS
Enrolment for University Studies

Selection criteria: Priority is given to degree students. Otherwise the selection criterion is the date of registration. Selections on view: The final course lists will be posted on the Language Centre's notice board on 29 August.

Enrolment time has expired
Heikki Kangasniemi, Teacher responsible
Tiina Nahkola, Teacher responsible
Teaching
1-Sep-2014 – 15-Oct-2014
Tutorials 39 hours
GroupA
Mon 1-Sep-2014 - 13-Oct-2014 weekly at 12-14, Pinni B3118
Wed 3-Sep-2014 at 12-14, Päätalo A07, Only one time
Thu 4-Sep-2014 - 9-Oct-2014 weekly at 12-14, Pinni B3118
Tue 9-Sep-2014 - 14-Oct-2014 weekly at 12-14, Päätalo A07
GroupB
Wed 3-Sep-2014 - 15-Oct-2014 weekly at 14-16, Päätalo E301
Thu 4-Sep-2014 - 9-Oct-2014 weekly at 14-16, Päätalo E301
Mon 8-Sep-2014 - 13-Oct-2014 weekly at 14-16, Päätalo A06
GroupC
Wed 3-Sep-2014 - 15-Oct-2014 weekly at 16-18, Päätalo A05
Thu 4-Sep-2014 - 9-Oct-2014 weekly at 16-18, Päätalo A05
Mon 8-Sep-2014 - 13-Oct-2014 weekly at 16-18, Päätalo A06
Independent work 41 hours
Periods: I
Language of instruction: English
YKYYKV1 Finnish Society and Culture (autumn 2014) 1 - 5 ECTS
Enrolment for University Studies

Enrolment to the course 18.8. - 5.9.2014
- UTA students: enrolment in NettiOpsu

- TUT and TAMK students: enrolment with electronic form:
(the form is available during the enrolment period)

https://elomake3.uta.fi/lomakkeet/12713/lomake.html
Enrolment time has expired
Teaching
10-Sep-2014 – 26-Nov-2014
Lectures
Wed 10-Sep-2014 - 26-Nov-2014 weekly at 18-20, Pinni B1100
Exceptions:
17-Sep-2014 at 18 –20 , Main building D10b
22-Oct-2014 at 18 –20 , Main building D10b
Periods: I II
Language of instruction: English
Periodi (27.10.2014 - 19.12.2014)
Syventävät opinnot [II Periodi]

Vieraalla kielellä annettava opetus [II Periodi]

BIO2085 Bioinformatics tools (Autumn 2014) 3 ECTS

Contents

- Genome browsers

- Biological databases

- Sequence comparison

- Analysis of gene regulation

- Functional annotation

Enrolment for University Studies
Enrolment time has expired
Juha Kesseli, Teacher responsible
juha.kesseli[ät]uta.fi
Teaching
27-Oct-2014 – 19-Dec-2014
Independent work 30 hours Web-based
Lectures 20 hours Web-based
Periods: II
Language of instruction: English
Further information:

Web-based course, no contact teaching. Open for exchange students with suitable background. An identical course is organised in period IV spring 2015.

Yleisopinnot [II Periodi]

Vieraalla kielellä annettava opetus [II Periodi]

KKENMP3 Scientific Writing - Module A - Writing Clinic (3 op) / BMT 3 ECTS
Enrolment for University Studies
Enrolment time has expired
Julie Rajala, Teacher responsible
Teaching
3-Nov-2014 – 30-May-2015
Group work 20 hours
Group 1
Mon 3-Nov-2014 - 15-Dec-2014 weekly at 12.30-14.30, Päätalo E3222, other classes online
Independent work 61 hours
Periods: II III
Language of instruction: English
Periodi (7.1.2015 - 13.3.2015)
Syventävät opinnot [III Periodi]

Vieraalla kielellä annettava opetus [III Periodi]

BIO4440 Biological data analysis with R 5 ECTS
Enrolment for University Studies
Enrolment time has expired
Juha Kesseli, Teacher responsible
juha.kesseli[ät]uta.fi
Teaching
13-Jan-2015 – 10-Mar-2015
Lectures
Lectures
Wed 7-Jan-2015 - 4-Mar-2015 weekly at 9-11, FM1/3rd floor
Tue 13-Jan-2015 - 3-Mar-2015 weekly at 13-15, FM1/3rd floor
Exercises
Exercises
Fri 16-Jan-2015 - 13-Mar-2015 weekly at 14-16, Computer classroom ML74 FM1 (5th floor)
Periods: III
Language of instruction: English
Further information:

Recommended during the first year of study in the bioinformatics Master's degree programme. BIO2200 and BIO2310 or equivalent knowledge required as a prerequisite.

BIO4420 Programming and algorithms for bioinformatics II 4 ECTS
Matti Annala, Teacher responsible
matti.annala[ät]uta.fi
Teaching
7-Jan-2015 – 22-May-2015
Lectures
Lectures
Thu 15-Jan-2015 - 16-Apr-2015 weekly at 10.15-12.00, FM1/HISTO
Exercises
Computer exercises
Tue 20-Jan-2015 - 21-Apr-2015 weekly at 10.15-12.00, ML74/FM1
Periods: III IV
Homepage URL: https://learning2.uta.fi/course/view.php?id=4830
Language of instruction: English
BIO2450 Advanced Bioinformatics Tools 4 ECTS

The course covers the following:

- Visualization and analysis of high-throughput data using web tools

- Mass spectrometry analysis

- Effect of a mutation on the 3D structure of a protein

- Accessing online databases through APIs

- Application of supervised learning methods

- DNA-sequencing data analysis

Teaching
7-Jan-2015 – 29-May-2015
Independent work 50 hours Web-based
Periods: III IV
Language of instruction: English
Further information:

Note! The course is suitable for biotechnology students without prior programming experience.

Yleisopinnot [III Periodi]

Vieraalla kielellä annettava opetus [III Periodi]

YKYYKV1 Finnish Society and Culture (spring 2015) - 1 - 5 ECTS

14.01.2015 Eero Ropo: Finnish Education System

21.01.2015 Elina Bonelius: Finnish Art History in a Nutshell

28.01.2015 Hannu Sinisalo: Cultural Boundaries of Finnishness and Ethnic Minorities in Finland

04.02.2015 Toni Lahtinen: Finnish Literature

11.02.2015 Seija-Leena Nevala-Nurmi: Finnish History – Finns and Finland between East and West

18.02.2015 Juho Kaitajärvi-Tiekso: Finnish Popular Music

25.02.2015 Tomi Nokelainen: Technology and Innovation in Finland: Current Issues and Future Challenges

04.03.2015 Ari Vanamo:  Finland – Living in and from the Forests

11.03.2015 Ulla-Maija Koivula: Finnish Welfare and Social Services

18.03.2015 Jyrki Jyrkiäinen: Special Features of Finnish Mass Media

24.03. Tuesday at 16-18: Exam

01.04. Wednesday at 18-20: Retake

Enrolment for University Studies

Enrolment to the course 24.11. - 11.1.2015
- UTA students: enrolment in NettiOpsu

- TUT and TAMK students: enrolment with electronic form:
(the form is available during the enrolment period)

https://elomake3.uta.fi/lomakkeet/13572/lomake.html
Enrolment time has expired
Teaching
14-Jan-2015 – 18-Mar-2015
Lectures
Wed 14-Jan-2015 - 18-Mar-2015 weekly at 18.00-20.00, Pinni B1096
Exceptions:
24-Mar-2015 at 16.00 –18.00 , Pinni B1096, course exam
1-Apr-2015 at 18.00 –20.00 , Pinni B1096, course exam retake
Periods: III IV
Language of instruction: English
Further information:

Contact person: Coordinator of international education, Anna Wansén-Kaseva

Periodi (16.3.2015 - 31.7.2015)
Syventävät opinnot [IV Periodi]

Vieraalla kielellä annettava opetus [IV Periodi]

BIO2085 Bioinformatics tools (Spring 2015) 3 ECTS

Contents

- Genome browsers

- Biological databases

- Sequence comparison

- Analysis of gene regulation

- Functional annotation

Enrolment for University Studies
Enrolment time has expired
Juha Kesseli, Teacher responsible
juha.kesseli[ät]uta.fi
Teaching
16-Mar-2015 – 22-May-2015
Independent work 30 hours Web-based
Lectures 20 hours Web-based
Periods: IV
Language of instruction: English
Further information:

Web-based course, no contact teaching. Open for exchange students with suitable background. An identical course is organised in autumn 2014 period II.

BIO4450 High throughput data analysis 5 ECTS
Enrolment for University Studies
Enrolment time has expired
Juha Kesseli, Teacher responsible
juha.kesseli[ät]uta.fi
Teaching
17-Mar-2015 – 22-May-2015
Lectures
Lectures
Wed 18-Mar-2015 - 20-May-2015 weekly at 9-11, Lecture hall FM1 (3rd floor)
Tue 24-Mar-2015 - 19-May-2015 weekly at 13-15, Lecture hall FM1 (3rd floor)
Exercises
Exercises
Fri 20-Mar-2015 - 22-May-2015 weekly at 14-16, Computer classroom ML74 FM1 (5th floor)
Periods: IV
Language of instruction: English
Further information:

BIO2200, BIO2310 and BIO4440 or equivalent knowledge required as a prerequisite.

BIO2230 Introduction to genetics 3 ECTS
Enrolment for University Studies
Enrolment time has expired
Kirsi Granberg, Teacher responsible
kirsi.granberg[ät]uta.fi
Teaching
16-Mar-2015 – 15-May-2015
Lectures
Lectures and exercises
Wed 18-Mar-2015 - 20-May-2015 weekly at 13-15, Computer classroom ML74 FM1 (5th floor)
Periods: IV
Language of instruction: English
Further information:

Notice that as due to a scheduling mistake the course will not be given in period 3. The implementation will take place in period 4.

BioMediTech
Tenttiminen