High-throughput Sequencing Data Analysis, 5 op

Contents:

• Characteristics of sequencing data

• Quality control

• High-throughput count data modeling

• MDS, tSNE, UMAP

• Data analysis pipeline design

• Common state-of-the-art algorithms for data analysis, for a variety of data types

• Basic approaches for data integration

• Introduction to systems biology

• Network modeling

• Design of high-throughput experiments